Genome Meta Information: Fusobacterium necrophorum F1291 (GCA_003732505.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_003732505.1 | ||
| HOMD Taxon-ID | HMT-0690 | ||
| Species Name (in use by HOMD) | Fusobacterium necrophorum | ||
| Organism Name (as deposited) | HMT-690 Fusobacterium necrophorum F1291 | ||
| Strain or Isolate | F1291 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Fusobacteriota;c__Fusobacteriia;o__Fusobacteriales;f__Fusobacteriaceae;g__Fusobacterium_C; s__Fusobacterium_C necrophorum |
||
| Sequencing Technology | PacBio | ||
| Genome Coverage | 281 | ||
| Contigs |
|
||
| Total Sequence Length | 2,135,983 (bp) | ||
| GC Percentage | 35.27 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/003/732/505/GCA_003732505.1_ASM373250v1 | ||
| CDS | 2010 | ||
| Genes | 2095 | ||
| mRNA | 2095 | ||
| misc RNA | 16 | ||
| rRNA | 17 | ||
| tRNA | 51 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.8 % | ||
| CheckM Completeness | 92.53 % | ||
| CheckM Contamination | 2.33 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 2 Contigs [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM373250v1 |
| GenBank Assembly Accession | GCA_003732505.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_003732505.1 [NCBI] |
| BioSample | SAMN06055349 [NCBI] |
| BioProject | PRJNA354964 [NCBI] |
| Submitter | Aarhus University |
| Submission Date | 2016-11-25T17:49:04.536 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 143387 |
| Isolation Source | blood |
| Geo Location | Denmark |
