Taxon Table | Genome Table
Genome Meta Information:
Kluyvera
ascorbata
OT2 (GCA_003789135.1)
| HOMD Genome-ID |
GCA_003789135.1
|
| HOMD Taxon-ID |
HMT-0865
|
| Species Name (in use by HOMD) |
Kluyvera ascorbata
|
| Organism Name (as deposited) |
HMT-865 Kluyvera ascorbata OT2
|
| Strain or Isolate |
OT2
|
GTDB (V226)
Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Kluyvera;
s__Kluyvera ascorbata |
| Sequencing Technology |
Illumina MiSeq
|
| Genome Coverage |
50
|
| Contigs |
Number of Contigs: 227
|
[Open
in Genome Viewer]
[Show
Sequence]
[Linkout to
NCBI]
|
|
| Total Sequence Length |
5,368,186 (bp) |
| GC Percentage |
53.89
|
| MAG |
|
| NCBI FTP URL |
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/003/789/135/GCA_003789135.1_ASM378913v1
|
| CDS |
5040
|
| Genes |
5278
|
| mRNA |
5278
|
| misc RNA |
145
|
| rRNA |
10
|
| tRNA |
82
|
| tmRNA |
1
|
| ANI (Average Nucluotide Identity) |
98.02 %
|
| CheckM Completeness |
100 %
|
| CheckM Contamination |
0.41 %
|
| CheckM2 Completeness |
0 %
|
| CheckM2 Contamination |
0 %
|
Difference
between
CheckM and CheckM2
Completeness |
200.0 %
|
| CRISPR-cas |
No Available
Data |
| Pangenomes |
1)
OpenAnvi`o (Interactive)
OpenSVG (Preview)
|
| Genome Assembly Name |
ASM378913v1
|
| GenBank Assembly Accession |
GCA_003789135.1
[NCBI]
[GTDB]
|
| RefSeq Assembly Accession |
GCF_003789135.1
[NCBI]
|
| BioSample |
SAMN10265530
[NCBI]
|
| BioProject |
PRJNA497745
[NCBI]
|
| Submitter |
UNIVERSIDADE FEDERAL DE CIENCIAS DA SAUDE DE PORTO ALEGRE
|
| Submission Date |
2018-10-21T18:26:05.410
|
| Assembly Method |
|
| Assembly Level |
Contig
|
| Sequencing Status |
|
| WGS
Project |
RHFN01
|
| NCBI TaxID |
51288
|
| Isolation Source |
abdominal collection
|
| Geo Location |
Brazil:Porto Alegre
|
