Genome Meta Information: Fusobacterium necrophorum FDAARGOS_565 (GCA_003812825.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_003812825.1 | ||
| HOMD Taxon-ID | HMT-0690 | ||
| Species Name (in use by HOMD) | Fusobacterium necrophorum | ||
| Organism Name (as deposited) | HMT-690 Fusobacterium necrophorum FDAARGOS_565 | ||
| Strain or Isolate | FDAARGOS_565 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Fusobacteriota;c__Fusobacteriia;o__Fusobacteriales;f__Fusobacteriaceae;g__Fusobacterium_C; s__Fusobacterium_C necrophorum |
||
| Sequencing Technology | PacBio; Illumina | ||
| Genome Coverage | 1223.51 | ||
| Contigs |
|
||
| Total Sequence Length | 2,678,402 (bp) | ||
| GC Percentage | 34.03 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/003/812/825/GCA_003812825.1_ASM381282v1 | ||
| CDS | 2345 | ||
| Genes | 2420 | ||
| mRNA | 2420 | ||
| misc RNA | 15 | ||
| rRNA | 18 | ||
| tRNA | 41 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.96 % | ||
| CheckM Completeness | 96.45 % | ||
| CheckM Contamination | 7.5 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 3 Contigs [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM381282v1 |
| GenBank Assembly Accession | GCA_003812825.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_003812825.1 [NCBI] |
| BioSample | SAMN10163189 [NCBI] |
| BioProject | PRJNA231221 [NCBI] |
| Submitter | US Food and Drug Administration |
| Submission Date | 2018-10-02T12:23:09.856 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 859 |
| Isolation Source | environmental |
| Geo Location | Unknown |
