Genome Meta Information: Streptococcus gordonii A8 (GCA_003943215.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_003943215.1 | ||
| HOMD Taxon-ID | HMT-0622 | ||
| Species Name (in use by HOMD) | Streptococcus gordonii | ||
| Organism Name (as deposited) | HMT-622 Streptococcus gordonii A8 | ||
| Strain or Isolate | A8 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus; s__Streptococcus gordonii |
||
| Sequencing Technology | Illumina MiSeq | ||
| Genome Coverage | 84 | ||
| Contigs |
|
||
| Total Sequence Length | 2,225,347 (bp) | ||
| GC Percentage | 40.34 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/003/943/215/GCA_003943215.1_ASM394321v1 | ||
| CDS | 2107 | ||
| Genes | 2212 | ||
| mRNA | 2212 | ||
| misc RNA | 52 | ||
| rRNA | 5 | ||
| tRNA | 47 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 95.62 % | ||
| CheckM Completeness | 99.74 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM394321v1 |
| GenBank Assembly Accession | GCA_003943215.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_003943215.1 [NCBI] |
| BioSample | SAMN09631709 [NCBI] |
| BioProject | PRJNA480251 [NCBI] |
| Submitter | Clemson University |
| Submission Date | 2018-07-09T11:29:04.820 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | RJOX01 |
| NCBI TaxID | 1302 |
| Isolation Source | dental plaque |
| Geo Location | USA: Florida |
