Genome Meta Information: Streptococcus anginosus KCOM 2412 (GCA_003963555.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_003963555.1 | ||
| HOMD Taxon-ID | HMT-0543 | ||
| Species Name (in use by HOMD) | Streptococcus anginosus | ||
| Organism Name (as deposited) | HMT-543 Streptococcus anginosus KCOM 2412 | ||
| Strain or Isolate | KCOM 2412 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus; s__Streptococcus anginosus |
||
| Sequencing Technology | Illumina HiSeq; PacBio | ||
| Genome Coverage | 1538.3 | ||
| Contigs |
|
||
| Total Sequence Length | 1,903,815 (bp) | ||
| GC Percentage | 38.95 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/003/963/555/GCA_003963555.1_ASM396355v1 | ||
| CDS | 1808 | ||
| Genes | 1914 | ||
| mRNA | 1914 | ||
| misc RNA | 34 | ||
| rRNA | 12 | ||
| tRNA | 59 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 99.65 % | ||
| CheckM Contamination | 0.68 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM396355v1 |
| GenBank Assembly Accession | GCA_003963555.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_003963555.1 [NCBI] |
| BioSample | SAMN10465145 [NCBI] |
| BioProject | PRJNA506614 [NCBI] |
| Submitter | Korean Collection for Oral Microbiology |
| Submission Date | 2018-11-23T00:10:05.226 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 2490633 |
| Isolation Source | Subgingival dental plaque |
| Geo Location | South Korea: Gwangju |
