Genome Meta Information: Hoylesella koreensis KCOM 3155 (GCA_003977605.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_003977605.1 | ||
| HOMD Taxon-ID | HMT-0526 | ||
| Species Name (in use by HOMD) | Hoylesella koreensis | ||
| Organism Name (as deposited) | HMT-526 Hoylesella koreensis KCOM 3155 | ||
| Strain or Isolate | KCOM 3155 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella; s__Prevotella koreensis |
||
| Sequencing Technology | Illumina HiSeq | ||
| Genome Coverage | 1114 | ||
| Contigs |
|
||
| Total Sequence Length | 2,691,540 (bp) | ||
| GC Percentage | 43.88 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/003/977/605/GCA_003977605.1_ASM397760v1 | ||
| CDS | 2347 | ||
| Genes | 2419 | ||
| mRNA | 2419 | ||
| misc RNA | 10 | ||
| rRNA | 9 | ||
| tRNA | 52 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 97.69 % | ||
| CheckM Contamination | 0.18 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM397760v1 |
| GenBank Assembly Accession | GCA_003977605.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_003977605.1 [NCBI] |
| BioSample | SAMN10461963 [NCBI] |
| BioProject | PRJNA506504 [NCBI] |
| Submitter | Korean Collection for Oral Microbiology |
| Submission Date | 2018-11-22T02:04:11.303 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | RYYU01 |
| NCBI TaxID | 2490854 |
| Isolation Source | subgingival plaque |
| Geo Location | South Korea: Gwangju |
