Genome Meta Information: Streptococcus salivarius bf_0095 (GCA_004166915.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_004166915.1 | ||
| HOMD Taxon-ID | HMT-0755 | ||
| Species Name (in use by HOMD) | Streptococcus salivarius | ||
| Organism Name (as deposited) | HMT-755 Streptococcus salivarius bf_0095 | ||
| Strain or Isolate | bf_0095 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus; s__Streptococcus salivarius |
||
| Sequencing Technology | Illumina HiSeq | ||
| Genome Coverage | 101.385 | ||
| Contigs |
|
||
| Total Sequence Length | 2,112,364 (bp) | ||
| GC Percentage | 40.06 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/004/166/915/GCA_004166915.1_ASM416691v1 | ||
| CDS | 1888 | ||
| Genes | 1971 | ||
| mRNA | 1971 | ||
| misc RNA | 31 | ||
| rRNA | 3 | ||
| tRNA | 48 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 96.6 % | ||
| CheckM Completeness | 98.15 % | ||
| CheckM Contamination | 2.29 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM416691v1 |
| GenBank Assembly Accession | GCA_004166915.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_004166915.1 [NCBI] |
| BioSample | SAMN10239557 [NCBI] |
| BioProject | PRJNA496358 [NCBI] |
| Submitter | Broad Institute |
| Submission Date | 2018-10-15T03:43:04.393 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | RCYT01 |
| NCBI TaxID | 1304 |
| Isolation Source | stool |
| Geo Location | USA: Cambridge |
