Genome Meta Information: Streptococcus thermophilus ATCC 19258 (GCA_004354505.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_004354505.1 | ||
| HOMD Taxon-ID | HMT-0152 | ||
| Species Name (in use by HOMD) | Streptococcus thermophilus | ||
| Organism Name (as deposited) | HMT-152 Streptococcus thermophilus ATCC 19258 | ||
| Strain or Isolate | ATCC 19258 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus; s__Streptococcus thermophilus |
||
| Sequencing Technology | Illumina | ||
| Genome Coverage | 60 | ||
| Contigs |
|
||
| Total Sequence Length | 2,074,705 (bp) | ||
| GC Percentage | 38.94 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/004/354/505/GCA_004354505.1_ASM435450v1 | ||
| CDS | 2208 | ||
| Genes | 2358 | ||
| mRNA | 2358 | ||
| misc RNA | 94 | ||
| rRNA | 9 | ||
| tRNA | 46 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.98 % | ||
| CheckM Completeness | 96.88 % | ||
| CheckM Contamination | 3.03 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 2 Contigs [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM435450v1 |
| GenBank Assembly Accession | GCA_004354505.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_004354505.1 [NCBI] |
| BioSample | SAMN08493372 [NCBI] |
| BioProject | PRJNA433425 [NCBI] |
| Submitter | Carlsberg Research Laboratory |
| Submission Date | 2018-02-07T19:40:03.217 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | PRKU01 |
| NCBI TaxID | 1308 |
| Isolation Source | missing |
| Geo Location | Denmark |
