Genome Meta Information: Staphylococcus hominis AtDRG32 (GCA_004365845.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_004365845.1 | ||
| HOMD Taxon-ID | HMT-0127 | ||
| Species Name (in use by HOMD) | Staphylococcus hominis | ||
| Organism Name (as deposited) | HMT-127 Staphylococcus hominis AtDRG32 | ||
| Strain or Isolate | AtDRG32 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Staphylococcales;f__Staphylococcaceae;g__Staphylococcus; s__Staphylococcus hominis |
||
| Sequencing Technology | Illumina HiSeq | ||
| Genome Coverage | 629 | ||
| Contigs |
|
||
| Total Sequence Length | 2,179,656 (bp) | ||
| GC Percentage | 31.38 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/004/365/845/GCA_004365845.1_ASM436584v1 | ||
| CDS | 2077 | ||
| Genes | 2196 | ||
| mRNA | 2196 | ||
| misc RNA | 51 | ||
| rRNA | 8 | ||
| tRNA | 59 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 99.25 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM436584v1 |
| GenBank Assembly Accession | GCA_004365845.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_004365845.1 [NCBI] |
| BioSample | SAMN05446790 [NCBI] |
| BioProject | PRJNA333996 [NCBI] |
| Submitter | DOE Joint Genome Institute |
| Submission Date | 2016-07-27T01:02:03.763 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | SODE01 |
| NCBI TaxID | 1938892 |
| Isolation Source | missing |
| Geo Location | missing |
