Genome Meta Information: Cellulosimicrobium funkei JCM 14302 (GCA_004519295.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_004519295.1 | ||
| HOMD Taxon-ID | HMT-0374 | ||
| Species Name (in use by HOMD) | Cellulosimicrobium funkei | ||
| Organism Name (as deposited) | HMT-374 Cellulosimicrobium funkei JCM 14302 | ||
| Strain or Isolate | JCM 14302 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Cellulomonadaceae;g__Cellulosimicrobium; s__Cellulosimicrobium funkei |
||
| Sequencing Technology | Illumina HiSeq | ||
| Genome Coverage | 693 | ||
| Contigs |
|
||
| Total Sequence Length | 4,377,803 (bp) | ||
| GC Percentage | 74.54 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/004/519/295/GCA_004519295.1_ASM451929v1 | ||
| CDS | 3902 | ||
| Genes | 3994 | ||
| mRNA | 3994 | ||
| misc RNA | 26 | ||
| rRNA | 3 | ||
| tRNA | 62 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.99 % | ||
| CheckM Completeness | 98.07 % | ||
| CheckM Contamination | 1.91 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM451929v1 |
| GenBank Assembly Accession | GCA_004519295.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_004519295.1 [NCBI] |
| BioSample | SAMN11090741 [NCBI] |
| BioProject | PRJNA526228 [NCBI] |
| Submitter | Dalian University of Technology |
| Submission Date | 2019-03-08T14:13:03.876 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | SOZH01 |
| NCBI TaxID | 264251 |
| Isolation Source | |
| Geo Location | China: Dalian |
