Genome Meta Information: Enterococcus faecalis FC (GCA_005158025.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_005158025.1 | ||
| HOMD Taxon-ID | HMT-0604 | ||
| Species Name (in use by HOMD) | Enterococcus faecalis | ||
| Organism Name (as deposited) | HMT-604 Enterococcus faecalis FC | ||
| Strain or Isolate | FC | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Enterococcaceae;g__Enterococcus; s__Enterococcus faecalis |
||
| Sequencing Technology | PacBio | ||
| Genome Coverage | 154 | ||
| Contigs |
|
||
| Total Sequence Length | 3,183,730 (bp) | ||
| GC Percentage | 37.2 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/005/158/025/GCA_005158025.1_ASM515802v1 | ||
| CDS | 3104 | ||
| Genes | 3260 | ||
| mRNA | 3260 | ||
| misc RNA | 80 | ||
| rRNA | 12 | ||
| tRNA | 63 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.1 % | ||
| CheckM Completeness | 95.95 % | ||
| CheckM Contamination | 0.55 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM515802v1 |
| GenBank Assembly Accession | GCA_005158025.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_005158025.1 [NCBI] |
| BioSample | SAMN08803040 [NCBI] |
| BioProject | PRJNA445927 [NCBI] |
| Submitter | Inner Mongolia University for the Nationalities |
| Submission Date | 2018-03-28T00:45:13.543 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 1351 |
| Isolation Source | milk |
| Geo Location | China |
