Genome Meta Information: Arachnia propionica F0700 (GCA_005696855.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_005696855.1 | ||
| HOMD Taxon-ID | HMT-739 | ||
| Species Name (in use by HOMD) | Arachnia propionica | ||
| Organism Name (as deposited) | HMT-739 Arachnia propionica F0700 | ||
| Strain or Isolate | F0700 | ||
| GTDB (V) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Propionibacteriales;f__Propionibacteriaceae;g__Arachnia; s__Arachnia propionica |
||
| Sequencing Technology | PacBio RS II | ||
| Genome Coverage | 129.0x | ||
| Contigs |
|
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| Total Sequence Length | 3,437,242 (bp) | ||
| GC Percentage | 66.08 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/005/696/855/GCA_005696855.1_ASM569685v1 | ||
| CDS | 3047 | ||
| Genes | 3127 | ||
| mRNA | 3127 | ||
| misc RNA | 21 | ||
| rRNA | 6 | ||
| tRNA | 52 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 98.99 % | ||
| CheckM Completeness | 97.47 % | ||
| CheckM Contamination | 1.22 % | ||
| CheckM2 Completeness | 100 % | ||
| CheckM2 Contamination | 0.11 % | ||
| CRISPR-cas | 2 Contigs [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM569685v1 |
| GenBank Assembly Accession | GCA_005696855.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_005696855.1 [NCBI] |
| BioSample | SAMN11483328 [NCBI] |
| BioProject | PRJNA282954 [NCBI] |
| Submitter | The Forsyth Institute |
| Submission Date | 2019-04-23T14:32:06.026 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 1750 |
| Isolation Source | human oral cavity D115 |
| Geo Location | USA: Blacksberg, Virginia |
