Genome Meta Information: Cutibacterium acnes T29350 (GCA_005773905.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_005773905.1 | ||
| HOMD Taxon-ID | HMT-0530 | ||
| Species Name (in use by HOMD) | Cutibacterium acnes | ||
| Organism Name (as deposited) | HMT-530 Cutibacterium acnes T29350 | ||
| Strain or Isolate | T29350 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Propionibacteriales;f__Propionibacteriaceae;g__Cutibacterium; s__Cutibacterium acnes |
||
| Sequencing Technology | Illumina MiSeq | ||
| Genome Coverage | 56.6 | ||
| Contigs |
|
||
| Total Sequence Length | 2,479,249 (bp) | ||
| GC Percentage | 60.06 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/005/773/905/GCA_005773905.1_ASM577390v1 | ||
| CDS | 2306 | ||
| Genes | 2379 | ||
| mRNA | 2379 | ||
| misc RNA | 23 | ||
| rRNA | 3 | ||
| tRNA | 46 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.71 % | ||
| CheckM Completeness | 97.14 % | ||
| CheckM Contamination | 0.37 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM577390v1 |
| GenBank Assembly Accession | GCA_005773905.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_005773905.1 [NCBI] |
| BioSample | SAMN11605677 [NCBI] |
| BioProject | PRJNA541974 [NCBI] |
| Submitter | University of Washington |
| Submission Date | 2019-05-08T16:59:05.510 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | VBXX01 |
| NCBI TaxID | 1747 |
| Isolation Source | Wound Right Shoulder STEM EXPLANT |
| Geo Location | USA |
