Genome Meta Information: Cutibacterium acnes T45864 (GCA_005937385.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_005937385.1 | ||
| HOMD Taxon-ID | HMT-0530 | ||
| Species Name (in use by HOMD) | Cutibacterium acnes | ||
| Organism Name (as deposited) | HMT-530 Cutibacterium acnes T45864 | ||
| Strain or Isolate | T45864 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Propionibacteriales;f__Propionibacteriaceae;g__Cutibacterium; s__Cutibacterium acnes |
||
| Sequencing Technology | Illumina MiSeq | ||
| Genome Coverage | 13 | ||
| Contigs |
|
||
| Total Sequence Length | 2,495,791 (bp) | ||
| GC Percentage | 60.24 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/005/937/385/GCA_005937385.1_ASM593738v1 | ||
| CDS | 2323 | ||
| Genes | 2394 | ||
| mRNA | 2394 | ||
| misc RNA | 22 | ||
| rRNA | 3 | ||
| tRNA | 44 | ||
| tmRNA | 2 | ||
| ANI (Average Nucluotide Identity) | 98.76 % | ||
| CheckM Completeness | 95.73 % | ||
| CheckM Contamination | 0.43 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM593738v1 |
| GenBank Assembly Accession | GCA_005937385.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_005937385.1 [NCBI] |
| BioSample | SAMN09289904 [NCBI] |
| BioProject | PRJNA474022 [NCBI] |
| Submitter | University of Washington |
| Submission Date | 2018-05-31T15:15:18.947 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | QJIE01 |
| NCBI TaxID | 1747 |
| Isolation Source | Tissue Shoulder Right GLENOID No. 2 |
| Geo Location | USA |
