Genome Meta Information: Arcanobacterium haemolyticum SCDR 1 (GCA_006088775.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_006088775.1 | ||
| HOMD Taxon-ID | HMT-0811 | ||
| Species Name (in use by HOMD) | Arcanobacterium haemolyticum | ||
| Organism Name (as deposited) | HMT-811 Arcanobacterium haemolyticum SCDR 1 | ||
| Strain or Isolate | SCDR 1 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Actinomycetaceae;g__Arcanobacterium; s__Arcanobacterium haemolyticum |
||
| Sequencing Technology | IonTorrent | ||
| Genome Coverage | 300 | ||
| Contigs |
|
||
| Total Sequence Length | 1,986,154 (bp) | ||
| GC Percentage | 55.47 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/006/088/775/GCA_006088775.1_ASM608877v1 | ||
| CDS | 1774 | ||
| Genes | 1846 | ||
| mRNA | 1846 | ||
| misc RNA | 8 | ||
| rRNA | 12 | ||
| tRNA | 51 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.61 % | ||
| CheckM Completeness | 98.34 % | ||
| CheckM Contamination | 0.95 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM608877v1 |
| GenBank Assembly Accession | GCA_006088775.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_006088775.1 [NCBI] |
| BioSample | SAMN10275032 [NCBI] |
| BioProject | PRJNA497988 [NCBI] |
| Submitter | King Saud University |
| Submission Date | 2018-10-23T07:10:06.013 |
| Assembly Method | |
| Assembly Level | Chromosome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 28264 |
| Isolation Source | missing |
| Geo Location | Saudi Arabia: Malaz area, Riya |
