Genome Meta Information: Burkholderia cepacia ATCC 25416 (GCA_006094315.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_006094315.1 | ||
| HOMD Taxon-ID | HMT-571 | ||
| Species Name (in use by HOMD) | Burkholderia cepacia | ||
| Organism Name (as deposited) | HMT-571 Burkholderia cepacia ATCC 25416 | ||
| Strain or Isolate | ATCC 25416 | ||
| GTDB (V) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Burkholderia; s__Burkholderia cepacia |
||
| Sequencing Technology | Oxford Nanopore GridION | ||
| Genome Coverage | 79.0x | ||
| Contigs |
|
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| Total Sequence Length | 8,574,389 (bp) | ||
| GC Percentage | 66.59 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/006/094/315/GCA_006094315.1_ASM609431v1 | ||
| CDS | 7735 | ||
| Genes | 7895 | ||
| mRNA | 7895 | ||
| misc RNA | 60 | ||
| rRNA | 18 | ||
| tRNA | 81 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.99 % | ||
| CheckM Completeness | 100 % | ||
| CheckM Contamination | 0.2 % | ||
| CheckM2 Completeness | 100 % | ||
| CheckM2 Contamination | 0.08 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM609431v1 |
| GenBank Assembly Accession | GCA_006094315.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_006094315.1 [NCBI] |
| BioSample | SAMN10591700 [NCBI] |
| BioProject | PRJNA509990 [NCBI] |
| Submitter | Zhejiang Tianke High Technology Development Co.Ltd. |
| Submission Date | 2018-12-14T01:53:07.080 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 983594 |
| Isolation Source | |
| Geo Location | missing |
