Genome Meta Information: Streptococcus australis E24 (GCA_006385805.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_006385805.1 | ||
| HOMD Taxon-ID | HMT-0073 | ||
| Species Name (in use by HOMD) | Streptococcus australis | ||
| Organism Name (as deposited) | HMT-073 Streptococcus australis E24 | ||
| Strain or Isolate | E24 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus; s__Streptococcus xiaochunlingii |
||
| Sequencing Technology | Illumina | ||
| Genome Coverage | 200 | ||
| Contigs |
|
||
| Total Sequence Length | 1,950,659 (bp) | ||
| GC Percentage | 42.03 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/006/385/805/GCA_006385805.1_ASM638580v1 | ||
| CDS | 1878 | ||
| Genes | 1972 | ||
| mRNA | 1972 | ||
| misc RNA | 38 | ||
| rRNA | 5 | ||
| tRNA | 50 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 99.42 % | ||
| CheckM Contamination | 0.19 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM638580v1 |
| GenBank Assembly Accession | GCA_006385805.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_006385805.1 [NCBI] |
| BioSample | SAMN12046468 [NCBI] |
| BioProject | PRJNA548721 [NCBI] |
| Submitter | shenyang medical colleage |
| Submission Date | 2019-06-13T10:22:06.600 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | VFSG01 |
| NCBI TaxID | 2589788 |
| Isolation Source | respiratory tract |
| Geo Location | China |
