Genome Meta Information: Cutibacterium acnes NBRC 107605 (GCA_006739385.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_006739385.1 | ||
| HOMD Taxon-ID | HMT-0530 | ||
| Species Name (in use by HOMD) | Cutibacterium acnes | ||
| Organism Name (as deposited) | HMT-530 Cutibacterium acnes NBRC 107605 | ||
| Strain or Isolate | NBRC 107605 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Propionibacteriales;f__Propionibacteriaceae;g__Cutibacterium; s__Cutibacterium acnes |
||
| Sequencing Technology | Illumina MiSeq; ONT GridION | ||
| Genome Coverage | 1300 | ||
| Contigs |
|
||
| Total Sequence Length | 2,494,738 (bp) | ||
| GC Percentage | 60.03 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/006/739/385/GCA_006739385.1_ASM673938v1 | ||
| CDS | 2306 | ||
| Genes | 2386 | ||
| mRNA | 2386 | ||
| misc RNA | 23 | ||
| rRNA | 9 | ||
| tRNA | 46 | ||
| tmRNA | 2 | ||
| ANI (Average Nucluotide Identity) | 99.97 % | ||
| CheckM Completeness | 97.3 % | ||
| CheckM Contamination | 0.62 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM673938v1 |
| GenBank Assembly Accession | GCA_006739385.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_006739385.1 [NCBI] |
| BioSample | SAMD00169823 [NCBI] |
| BioProject | PRJDB8042 [NCBI] |
| Submitter | Biological Resource Center, National Institute of Technology and Evaluation (NBRC) |
| Submission Date | 2019-04-26T01:01:09.843 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 1734925 |
| Isolation Source | |
| Geo Location | missing |
