Genome Meta Information: Staphylococcus haemolyticus SDB1 (GCA_007004265.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_007004265.1 | ||
| HOMD Taxon-ID | HMT-0120 | ||
| Species Name (in use by HOMD) | Staphylococcus haemolyticus | ||
| Organism Name (as deposited) | HMT-120 Staphylococcus haemolyticus SDB1 | ||
| Strain or Isolate | SDB1 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Staphylococcales;f__Staphylococcaceae;g__Staphylococcus; s__Staphylococcus haemolyticus |
||
| Sequencing Technology | Illumina HiSeq | ||
| Genome Coverage | 165.3 | ||
| Contigs |
|
||
| Total Sequence Length | 2,468,753 (bp) | ||
| GC Percentage | 32.84 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/007/004/265/GCA_007004265.1_ASM700426v1 | ||
| CDS | 2405 | ||
| Genes | 2550 | ||
| mRNA | 2550 | ||
| misc RNA | 80 | ||
| rRNA | 6 | ||
| tRNA | 58 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 97.39 % | ||
| CheckM Completeness | 99.22 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM700426v1 |
| GenBank Assembly Accession | GCA_007004265.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_007004265.1 [NCBI] |
| BioSample | SAMN12211902 [NCBI] |
| BioProject | PRJNA552487 [NCBI] |
| Submitter | University of New Hampshire |
| Submission Date | 2019-07-03T12:28:04.366 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | VJMO01 |
| NCBI TaxID | 1283 |
| Isolation Source | desert soil |
| Geo Location | USA: New Mexico, Sevilleta Des |
