Genome Meta Information: Corynebacterium aurimucosum 2274 (GCA_007097425.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_007097425.1 | ||
| HOMD Taxon-ID | HMT-0450 | ||
| Species Name (in use by HOMD) | Corynebacterium aurimucosum | ||
| Organism Name (as deposited) | HMT-450 Corynebacterium aurimucosum clade-450 2274 | ||
| Strain or Isolate | 2274 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium; s__Corynebacterium hiratae |
||
| Sequencing Technology | IonTorrent | ||
| Genome Coverage | 1068 | ||
| Contigs |
|
||
| Total Sequence Length | 2,865,662 (bp) | ||
| GC Percentage | 61.06 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/007/097/425/GCA_007097425.1_ASM709742v1 | ||
| CDS | 2779 | ||
| Genes | 2847 | ||
| mRNA | 0 | ||
| misc RNA | 8 | ||
| rRNA | 8 | ||
| tRNA | 52 | ||
| tmRNA | 0 | ||
| ANI (Average Nucluotide Identity) | 96.67 % | ||
| CheckM Completeness | 89.94 % | ||
| CheckM Contamination | 0.14 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes |
1)
OpenAnvi`o (Interactive)
OpenSVG (Preview)
2) OpenAnvi`o (Interactive) OpenSVG (Preview) |
||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM709742v1 |
| GenBank Assembly Accession | GCA_007097425.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_007097425.1 [NCBI] |
| BioSample | SAMN12257092 [NCBI] |
| BioProject | PRJNA510229 [NCBI] |
| Submitter | Federal University of Bahia |
| Submission Date | 2019-07-11T20:35:04.103 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | VKDK01 |
| NCBI TaxID | 3139423 |
| Isolation Source | urine |
| Geo Location | Brazil |
