Genome Meta Information: Corynebacterium gottingense LMG 29598 (GCA_007559235.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_007559235.1 | ||
| HOMD Taxon-ID | HMT-0207 | ||
| Species Name (in use by HOMD) | Corynebacterium gottingense | ||
| Organism Name (as deposited) | HMT-207 Corynebacterium gottingense LMG 29598 | ||
| Strain or Isolate | LMG 29598 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium; s__Corynebacterium gottingense |
||
| Sequencing Technology | Illumina MiSeq | ||
| Genome Coverage | 72 | ||
| Contigs |
|
||
| Total Sequence Length | 2,529,719 (bp) | ||
| GC Percentage | 65.63 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/007/559/235/GCA_007559235.1_ASM755923v1 | ||
| CDS | 2288 | ||
| Genes | 2359 | ||
| mRNA | 2359 | ||
| misc RNA | 10 | ||
| rRNA | 4 | ||
| tRNA | 56 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.99 % | ||
| CheckM Completeness | 99.41 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM755923v1 |
| GenBank Assembly Accession | GCA_007559235.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_007559235.1 [NCBI] |
| BioSample | SAMN12335367 [NCBI] |
| BioProject | PRJNA555895 [NCBI] |
| Submitter | National Microbiology Laboratory |
| Submission Date | 2019-07-22T12:12:03.626 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | VMHH01 |
| NCBI TaxID | 2054421 |
| Isolation Source | fresh water |
| Geo Location | India: Nashik |
