Genome Meta Information: Streptococcus salivarius LAB813 (GCA_008305695.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_008305695.1 | ||
| HOMD Taxon-ID | HMT-0755 | ||
| Species Name (in use by HOMD) | Streptococcus salivarius | ||
| Organism Name (as deposited) | HMT-755 Streptococcus salivarius LAB813 | ||
| Strain or Isolate | LAB813 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus; s__Streptococcus salivarius_D |
||
| Sequencing Technology | PacBio RSII | ||
| Genome Coverage | 246 | ||
| Contigs |
|
||
| Total Sequence Length | 2,426,257 (bp) | ||
| GC Percentage | 39.71 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/008/305/695/GCA_008305695.1_ASM830569v1 | ||
| CDS | 2218 | ||
| Genes | 2361 | ||
| mRNA | 2361 | ||
| misc RNA | 45 | ||
| rRNA | 23 | ||
| tRNA | 74 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 95.92 % | ||
| CheckM Completeness | 97.77 % | ||
| CheckM Contamination | 3.2 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM830569v1 |
| GenBank Assembly Accession | GCA_008305695.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_008305695.1 [NCBI] |
| BioSample | SAMN11947030 [NCBI] |
| BioProject | PRJNA546007 [NCBI] |
| Submitter | University of Toronto |
| Submission Date | 2019-06-03T17:06:06.596 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 1304 |
| Isolation Source | |
| Geo Location | Canada: Faculty of Dentistry, |
