Genome Meta Information: Streptococcus cristatus S22 (GCA_008369405.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_008369405.1 | ||
| HOMD Taxon-ID | HMT-0578 | ||
| Species Name (in use by HOMD) | Streptococcus cristatus | ||
| Organism Name (as deposited) | HMT-578 Streptococcus cristatus S22 | ||
| Strain or Isolate | S22 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus; s__Streptococcus cristatus_G |
||
| Sequencing Technology | PacBio Sequel | ||
| Genome Coverage | 150 | ||
| Contigs |
|
||
| Total Sequence Length | 2,041,836 (bp) | ||
| GC Percentage | 42.4 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/008/369/405/GCA_008369405.1_ASM836940v1 | ||
| CDS | 1979 | ||
| Genes | 2081 | ||
| mRNA | 2081 | ||
| misc RNA | 59 | ||
| rRNA | 3 | ||
| tRNA | 39 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 94.26 % | ||
| CheckM Completeness | 99.52 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM836940v1 |
| GenBank Assembly Accession | GCA_008369405.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_008369405.1 [NCBI] |
| BioSample | SAMN12606070 [NCBI] |
| BioProject | PRJNA561044 [NCBI] |
| Submitter | Hangzhou center for disease control and prevention |
| Submission Date | 2019-08-20T03:31:05.020 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | VSJJ01 |
| NCBI TaxID | 45634 |
| Isolation Source | throat swab |
| Geo Location | China: Hangzhou, Zhejiang |
