Taxon Table | Genome Table
Genome Meta Information:
Corynebacterium
tuscaniense
CCUG 51321T (GCA_008693065.1)
| HOMD Genome-ID |
GCA_008693065.1
|
| HOMD Taxon-ID |
HMT-0184
|
| Species Name (in use by HOMD) |
Corynebacterium tuscaniense
|
| Organism Name (as deposited) |
HMT-184 Corynebacterium tuscaniense CCUG 51321T
|
| Strain or Isolate |
CCUG 51321T
|
GTDB (V226)
Taxonomy |
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium;
s__Corynebacterium tuscaniense |
| Sequencing Technology |
Illumina HiSeq
|
| Genome Coverage |
345.17
|
| Contigs |
Number of Contigs: 223
|
[Open
in Genome Viewer]
[Show
Sequence]
[Linkout to
NCBI]
|
|
| Total Sequence Length |
2,263,530 (bp) |
| GC Percentage |
59.41
|
| MAG |
|
| NCBI FTP URL |
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/008/693/065/GCA_008693065.1_ASM869306v1
|
| CDS |
2194
|
| Genes |
2261
|
| mRNA |
2261
|
| misc RNA |
8
|
| rRNA |
6
|
| tRNA |
52
|
| tmRNA |
1
|
| ANI (Average Nucluotide Identity) |
99.99 %
|
| CheckM Completeness |
98.35 %
|
| CheckM Contamination |
0.56 %
|
| CheckM2 Completeness |
0 %
|
| CheckM2 Contamination |
0 %
|
Difference
between
CheckM and CheckM2
Completeness |
200.0 %
|
| CRISPR-cas |
1 Contig
[View]
[HOMD FTP]
|
| Pangenomes |
1)
OpenAnvi`o (Interactive)
OpenSVG (Preview)
|
| Genome Assembly Name |
ASM869306v1
|
| GenBank Assembly Accession |
GCA_008693065.1
[NCBI]
[GTDB]
|
| RefSeq Assembly Accession |
GCF_008693065.1
[NCBI]
|
| BioSample |
SAMN12771122
[NCBI]
|
| BioProject |
PRJNA563568
[NCBI]
|
| Submitter |
University of Gothenburg - CCUG
|
| Submission Date |
2019-09-17T05:21:06.550
|
| Assembly Method |
|
| Assembly Level |
Contig
|
| Sequencing Status |
|
| WGS
Project |
VXKH01
|
| NCBI TaxID |
302449
|
| Isolation Source |
blood
|
| Geo Location |
Italy: Lucca
|
