Genome Meta Information: Corynebacterium jeikeium UMB9256 (GCA_008726175.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_008726175.1 | ||
| HOMD Taxon-ID | HMT-0047 | ||
| Species Name (in use by HOMD) | Corynebacterium jeikeium | ||
| Organism Name (as deposited) | HMT-031 Corynebacterium amycolatum UMB9256 | ||
| Strain or Isolate | UMB9256 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium; s__Corynebacterium jeikeium_D |
||
| Sequencing Technology | Illumina MiSeq | ||
| Genome Coverage | 40.09 | ||
| Contigs |
|
||
| Total Sequence Length | 2,565,104 (bp) | ||
| GC Percentage | 58.8 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/008/726/175/GCA_008726175.1_ASM872617v1 | ||
| CDS | 2221 | ||
| Genes | 2295 | ||
| mRNA | 2295 | ||
| misc RNA | 13 | ||
| rRNA | 7 | ||
| tRNA | 53 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 95.15 % | ||
| CheckM Completeness | 99.49 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM872617v1 |
| GenBank Assembly Accession | GCA_008726175.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_008726175.1 [NCBI] |
| BioSample | SAMN12797048 [NCBI] |
| BioProject | PRJNA316969 [NCBI] |
| Submitter | Loyola University Chicago |
| Submission Date | 2019-09-20T10:47:06.107 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | VYVD01 |
| NCBI TaxID | 43765 |
| Isolation Source | |
| Geo Location | USA: Maywood, IL |
