Genome Meta Information: Streptococcus mitis SM30 (GCA_009496045.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_009496045.1 | ||
| HOMD Taxon-ID | HMT-677 | ||
| Species Name (in use by HOMD) | Streptococcus mitis | ||
| Organism Name (as deposited) | HMT-677 Streptococcus mitis SM30 | ||
| Strain or Isolate | SM30 | ||
| GTDB (V) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus; s__Streptococcus mitis_BM |
||
| Sequencing Technology | Illumina MiSeq | ||
| Genome Coverage | 51.3x | ||
| Contigs |
|
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| Total Sequence Length | 2,007,955 (bp) | ||
| GC Percentage | 39.97 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/009/496/045/GCA_009496045.1_ASM949604v1 | ||
| CDS | 1900 | ||
| Genes | 1996 | ||
| mRNA | 1996 | ||
| misc RNA | 47 | ||
| rRNA | 5 | ||
| tRNA | 43 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 93.75 % | ||
| CheckM Completeness | 99.82 % | ||
| CheckM Contamination | 0.6 % | ||
| CheckM2 Completeness | 99.99 % | ||
| CheckM2 Contamination | 0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes (Beta) |
View in Anvi`o:
Streptococcus__mitis__HMT_677
(Interactive)
View SVG Image |
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| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM949604v1 |
| GenBank Assembly Accession | GCA_009496045.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_009496045.1 [NCBI] |
| BioSample | SAMN13105963 [NCBI] |
| BioProject | PRJNA316969 [NCBI] |
| Submitter | Loyola University Chicago |
| Submission Date | 2019-10-23T20:38:04.637 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | WIJX01 |
| NCBI TaxID | 28037 |
| Isolation Source | |
| Geo Location | USA: Maywood, IL |
