Genome Meta Information: Enterobacter cancerogenus MiY-F (GCA_009648915.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_009648915.1 | ||
| HOMD Taxon-ID | HMT-0565 | ||
| Species Name (in use by HOMD) | Enterobacter cancerogenus | ||
| Organism Name (as deposited) | HMT-565 Enterobacter cancerogenus MiY-F | ||
| Strain or Isolate | MiY-F | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Enterobacter; s__Enterobacter cancerogenus |
||
| Sequencing Technology | Oxford Nanopore GridION, Illumina MiSeq | ||
| Genome Coverage | |||
| Contigs |
|
||
| Total Sequence Length | 4,992,573 (bp) | ||
| GC Percentage | 55.59 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/009/648/915/GCA_009648915.1_ASM964891v1 | ||
| CDS | 4549 | ||
| Genes | 4798 | ||
| mRNA | 4798 | ||
| misc RNA | 137 | ||
| rRNA | 25 | ||
| tRNA | 86 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 98.97 % | ||
| CheckM Completeness | 98.96 % | ||
| CheckM Contamination | 0.83 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM964891v1 |
| GenBank Assembly Accession | GCA_009648915.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_009648915.1 [NCBI] |
| BioSample | SAMN10574725 [NCBI] |
| BioProject | PRJNA541977 [NCBI] |
| Submitter | FDA Center for Food Safety and Applied Nutrition |
| Submission Date | 2018-12-10T14:31:04.130 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 69218 |
| Isolation Source | cilantro |
| Geo Location | USA:MI |
