Genome Meta Information: Veillonella parvula BIOML-A1 (GCA_009710745.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_009710745.1 | ||
| HOMD Taxon-ID | HMT-0161 | ||
| Species Name (in use by HOMD) | Veillonella parvula | ||
| Organism Name (as deposited) | HMT-161 Veillonella parvula BIOML-A1 | ||
| Strain or Isolate | BIOML-A1 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Negativicutes;o__Veillonellales;f__Veillonellaceae;g__Veillonella; s__Veillonella parvula_E |
||
| Sequencing Technology | Illumina NextSeq | ||
| Genome Coverage | 959.41 | ||
| Contigs |
|
||
| Total Sequence Length | 2,155,958 (bp) | ||
| GC Percentage | 38.96 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/009/710/745/GCA_009710745.1_ASM971074v1 | ||
| CDS | 1890 | ||
| Genes | 1969 | ||
| mRNA | 1969 | ||
| misc RNA | 23 | ||
| rRNA | 8 | ||
| tRNA | 47 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 96.84 % | ||
| CheckM Completeness | 96.09 % | ||
| CheckM Contamination | 1.71 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM971074v1 |
| GenBank Assembly Accession | GCA_009710745.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_009710745.1 [NCBI] |
| BioSample | SAMN11946668 [NCBI] |
| BioProject | PRJNA544527 [NCBI] |
| Submitter | Massachusetts Institute of Technology |
| Submission Date | 2019-06-03T16:41:21.660 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | WMKM01 |
| NCBI TaxID | 29466 |
| Isolation Source | |
| Geo Location | USA:Boston |
