Genome Meta Information: Bacteroides ovatus FDAARGOS_733 (GCA_009734165.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_009734165.1 | ||
| HOMD Taxon-ID | HMT-968 | ||
| Species Name (in use by HOMD) | Bacteroides ovatus | ||
| Organism Name (as deposited) | HMT-968 Bacteroides ovatus FDAARGOS_733 | ||
| Strain or Isolate | FDAARGOS_733 | ||
| GTDB (V) Taxonomy |
d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Bacteroides; s__Bacteroides ovatus |
||
| Sequencing Technology | Pacbio; Illumina | ||
| Genome Coverage | 658.3x | ||
| Contigs |
|
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| Total Sequence Length | 6,571,392 (bp) | ||
| GC Percentage | 41.98 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/009/734/165/GCA_009734165.1_ASM973416v1 | ||
| CDS | 5076 | ||
| Genes | 5182 | ||
| mRNA | 5182 | ||
| misc RNA | 18 | ||
| rRNA | 16 | ||
| tRNA | 71 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 97.23 % | ||
| CheckM Completeness | 99.46 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 99.99 % | ||
| CheckM2 Contamination | 0.8 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM973416v1 |
| GenBank Assembly Accession | GCA_009734165.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_009734165.1 [NCBI] |
| BioSample | SAMN11056448 [NCBI] |
| BioProject | PRJNA231221 [NCBI] |
| Submitter | US Food and Drug Administration |
| Submission Date | 2019-03-05T13:52:07.550 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 28116 |
| Isolation Source | inflamed biopsy tissue from sigmoid colon |
| Geo Location | USA:VA |
