Genome Meta Information: Dialister invisus P2A-1 (GCA_009739355.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_009739355.1 | ||
| HOMD Taxon-ID | HMT-0118 | ||
| Species Name (in use by HOMD) | Dialister invisus | ||
| Organism Name (as deposited) | HMT-118 Dialister invisus P2A-1 | ||
| Strain or Isolate | P2A-1 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Negativicutes;o__Veillonellales;f__Dialisteraceae;g__Dialister; s__Dialister invisus |
||
| Sequencing Technology | Oxford Nanopore MiniION | ||
| Genome Coverage | 55 | ||
| Contigs |
|
||
| Total Sequence Length | 1,894,694 (bp) | ||
| GC Percentage | 45.35 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/009/739/355/GCA_009739355.1_ASM973935v1 | ||
| CDS | 1791 | ||
| Genes | 1907 | ||
| mRNA | 1907 | ||
| misc RNA | 50 | ||
| rRNA | 12 | ||
| tRNA | 53 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 97.74 % | ||
| CheckM Completeness | 99.06 % | ||
| CheckM Contamination | 1.73 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM973935v1 |
| GenBank Assembly Accession | GCA_009739355.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_009739355.1 [NCBI] |
| BioSample | SAMN10723579 [NCBI] |
| BioProject | PRJNA508395 [NCBI] |
| Submitter | Stanford University |
| Submission Date | 2019-01-10T15:21:04.383 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | SCPI01 |
| NCBI TaxID | 218538 |
| Isolation Source | human stool |
| Geo Location | not applicable |
