Genome Meta Information: Staphylococcus haemolyticus SDF1 (GCA_009791315.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_009791315.1 | ||
| HOMD Taxon-ID | HMT-0120 | ||
| Species Name (in use by HOMD) | Staphylococcus haemolyticus | ||
| Organism Name (as deposited) | HMT-120 Staphylococcus haemolyticus SDF1 | ||
| Strain or Isolate | SDF1 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Staphylococcales;f__Staphylococcaceae;g__Staphylococcus; s__Staphylococcus haemolyticus |
||
| Sequencing Technology | Illumina HiSeq | ||
| Genome Coverage | 77 | ||
| Contigs |
|
||
| Total Sequence Length | 2,477,199 (bp) | ||
| GC Percentage | 32.87 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/009/791/315/GCA_009791315.1_ASM979131v1 | ||
| CDS | 2404 | ||
| Genes | 2549 | ||
| mRNA | 2549 | ||
| misc RNA | 77 | ||
| rRNA | 8 | ||
| tRNA | 59 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 97.39 % | ||
| CheckM Completeness | 98.51 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM979131v1 |
| GenBank Assembly Accession | GCA_009791315.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_009791315.1 [NCBI] |
| BioSample | SAMN13560664 [NCBI] |
| BioProject | PRJNA552487 [NCBI] |
| Submitter | University of New Hampshire |
| Submission Date | 2019-12-13T13:52:03.620 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | WSYI01 |
| NCBI TaxID | 1283 |
| Isolation Source | desert soil |
| Geo Location | USA: New Mexico, Sevilleta Des |
