Genome Meta Information: Klebsiella aerogenes HNHF1 (GCA_009909445.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_009909445.1 | ||
| HOMD Taxon-ID | HMT-0153 | ||
| Species Name (in use by HOMD) | Klebsiella aerogenes | ||
| Organism Name (as deposited) | HMT-153 Klebsiella aerogenes HNHF1 | ||
| Strain or Isolate | HNHF1 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Klebsiella; s__Klebsiella aerogenes |
||
| Sequencing Technology | Oxford Nanopore MiniION; Illumina-Hiseq | ||
| Genome Coverage | 100 | ||
| Contigs |
|
||
| Total Sequence Length | 5,487,999 (bp) | ||
| GC Percentage | 54.71 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/009/909/445/GCA_009909445.1_ASM990944v1 | ||
| CDS | 5092 | ||
| Genes | 5339 | ||
| mRNA | 5339 | ||
| misc RNA | 132 | ||
| rRNA | 25 | ||
| tRNA | 89 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.38 % | ||
| CheckM Completeness | 97.55 % | ||
| CheckM Contamination | 2.55 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM990944v1 |
| GenBank Assembly Accession | GCA_009909445.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_009909445.1 [NCBI] |
| BioSample | SAMN13829509 [NCBI] |
| BioProject | PRJNA600670 [NCBI] |
| Submitter | Yangzhou University |
| Submission Date | 2020-01-12T03:21:04.766 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 548 |
| Isolation Source | chicken manure |
| Geo Location | China: HeNan |
