Genome Meta Information: Staphylococcus haemolyticus SE3.8 (GCA_009932885.2)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_009932885.2 | ||
| HOMD Taxon-ID | HMT-0120 | ||
| Species Name (in use by HOMD) | Staphylococcus haemolyticus | ||
| Organism Name (as deposited) | HMT-120 Staphylococcus haemolyticus SE3.8 | ||
| Strain or Isolate | SE3.8 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Staphylococcales;f__Staphylococcaceae;g__Staphylococcus; s__Staphylococcus haemolyticus |
||
| Sequencing Technology | Oxford Nanopore MinION; Illumina MiSeq | ||
| Genome Coverage | 46 | ||
| Contigs |
|
||
| Total Sequence Length | 2,396,207 (bp) | ||
| GC Percentage | 32.69 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/009/932/885/GCA_009932885.2_ASM993288v2 | ||
| CDS | 2292 | ||
| Genes | 2454 | ||
| mRNA | 2454 | ||
| misc RNA | 79 | ||
| rRNA | 19 | ||
| tRNA | 63 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 97.1 % | ||
| CheckM Completeness | 99.2 % | ||
| CheckM Contamination | 0.72 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM993288v2 |
| GenBank Assembly Accession | GCA_009932885.2 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_009932885.2 [NCBI] |
| BioSample | SAMN03097235 [NCBI] |
| BioProject | PRJNA263226 [NCBI] |
| Submitter | CSIR-Institute of Microbial Technology |
| Submission Date | 2014-10-06T07:58:33.657 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 1283 |
| Isolation Source | Rice seed |
| Geo Location | India |
