Genome Meta Information: Kingella kingae ATCC 23331 (GCA_011612705.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_011612705.1 | ||
| HOMD Taxon-ID | HMT-0646 | ||
| Species Name (in use by HOMD) | Kingella kingae | ||
| Organism Name (as deposited) | HMT-646 Kingella kingae ATCC 23331 | ||
| Strain or Isolate | ATCC 23331 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Neisseriaceae;g__Kingella; s__Kingella kingae |
||
| Sequencing Technology | PacBio Sequel | ||
| Genome Coverage | 418 | ||
| Contigs |
|
||
| Total Sequence Length | 2,018,460 (bp) | ||
| GC Percentage | 46.53 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/011/612/705/GCA_011612705.1_ASM1161270v1 | ||
| CDS | 2037 | ||
| Genes | 2124 | ||
| mRNA | 2124 | ||
| misc RNA | 20 | ||
| rRNA | 12 | ||
| tRNA | 54 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 98.5 % | ||
| CheckM Completeness | 97.81 % | ||
| CheckM Contamination | 0.65 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | Ambiguous [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM1161270v1 |
| GenBank Assembly Accession | GCA_011612705.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_011612705.1 [NCBI] |
| BioSample | SAMN14365914 [NCBI] |
| BioProject | PRJNA549513 [NCBI] |
| Submitter | Forsyth Institute |
| Submission Date | 2020-03-12T11:26:09.540 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 504 |
| Isolation Source | not applicable |
| Geo Location | not available |
