Genome Meta Information: Streptococcus mutans FDAARGOS_685 (GCA_012273155.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_012273155.1 | ||
| HOMD Taxon-ID | HMT-0686 | ||
| Species Name (in use by HOMD) | Streptococcus mutans | ||
| Organism Name (as deposited) | HMT-686 Streptococcus mutans FDAARGOS_685 | ||
| Strain or Isolate | FDAARGOS_685 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus; s__Streptococcus mutans |
||
| Sequencing Technology | Pacbio; Illumina | ||
| Genome Coverage | 3124.15 | ||
| Contigs |
|
||
| Total Sequence Length | 2,054,143 (bp) | ||
| GC Percentage | 36.89 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/012/273/155/GCA_012273155.1_ASM1227315v1 | ||
| CDS | 1921 | ||
| Genes | 2031 | ||
| mRNA | 2031 | ||
| misc RNA | 29 | ||
| rRNA | 15 | ||
| tRNA | 65 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.99 % | ||
| CheckM Completeness | 99.57 % | ||
| CheckM Contamination | 1.54 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 2 Contigs [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM1227315v1 |
| GenBank Assembly Accession | GCA_012273155.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_012273155.1 [NCBI] |
| BioSample | SAMN11056400 [NCBI] |
| BioProject | PRJNA231221 [NCBI] |
| Submitter | US Food and Drug Administration |
| Submission Date | 2019-03-05T13:52:06.670 |
| Assembly Method | |
| Assembly Level | Chromosome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 1309 |
| Isolation Source | ATCC Isolate |
| Geo Location | USA:VA |
