Genome Meta Information: Campylobacter ureolyticus FDAARGOS_673 (GCA_012273175.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_012273175.1 | ||
| HOMD Taxon-ID | HMT-0842 | ||
| Species Name (in use by HOMD) | Campylobacter ureolyticus | ||
| Organism Name (as deposited) | HMT-842 Campylobacter ureolyticus FDAARGOS_673 | ||
| Strain or Isolate | FDAARGOS_673 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Campylobacterota;c__Campylobacteria;o__Campylobacterales;f__Campylobacteraceae;g__Campylobacter_B; s__Campylobacter_B ureolyticus |
||
| Sequencing Technology | Pacbio; Illumina | ||
| Genome Coverage | 2657.06 | ||
| Contigs |
|
||
| Total Sequence Length | 1,559,279 (bp) | ||
| GC Percentage | 29.25 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/012/273/175/GCA_012273175.1_ASM1227317v1 | ||
| CDS | 1546 | ||
| Genes | 1602 | ||
| mRNA | 1602 | ||
| misc RNA | 5 | ||
| rRNA | 6 | ||
| tRNA | 44 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 95.89 % | ||
| CheckM Completeness | 97.71 % | ||
| CheckM Contamination | 0.7 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM1227317v1 |
| GenBank Assembly Accession | GCA_012273175.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_012273175.1 [NCBI] |
| BioSample | SAMN11056388 [NCBI] |
| BioProject | PRJNA231221 [NCBI] |
| Submitter | US Food and Drug Administration |
| Submission Date | 2019-03-05T13:52:06.443 |
| Assembly Method | |
| Assembly Level | Chromosome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 827 |
| Isolation Source | Urethra of man with non-gonococcal urethritis. |
| Geo Location | USA:VA |
