Genome Meta Information: Gemella haemolysans FDAARGOS_740 (GCA_012273215.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_012273215.1 | ||
| HOMD Taxon-ID | HMT-0434 | ||
| Species Name (in use by HOMD) | Gemella haemolysans | ||
| Organism Name (as deposited) | HMT-434 Gemella haemolysans clade-434 FDAARGOS_740 | ||
| Strain or Isolate | FDAARGOS_740 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Staphylococcales;f__Gemellaceae;g__Gemella; s__Gemella haemolysans_A |
||
| Sequencing Technology | Pacbio; Illumina | ||
| Genome Coverage | 2006.7 | ||
| Contigs |
|
||
| Total Sequence Length | 2,081,429 (bp) | ||
| GC Percentage | 30.83 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/012/273/215/GCA_012273215.1_ASM1227321v1 | ||
| CDS | 1897 | ||
| Genes | 1983 | ||
| mRNA | 0 | ||
| misc RNA | 32 | ||
| rRNA | 12 | ||
| tRNA | 41 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 87.87 % | ||
| CheckM Completeness | 98.49 % | ||
| CheckM Contamination | 1.75 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes |
1)
OpenAnvi`o (Interactive)
OpenSVG (Preview)
2) OpenAnvi`o (Interactive) OpenSVG (Preview) |
||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM1227321v1 |
| GenBank Assembly Accession | GCA_012273215.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_012273215.1 [NCBI] |
| BioSample | SAMN11056455 [NCBI] |
| BioProject | PRJNA231221 [NCBI] |
| Submitter | US Food and Drug Administration |
| Submission Date | 2019-03-05T13:52:07.680 |
| Assembly Method | |
| Assembly Level | Chromosome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 1379 |
| Isolation Source | expectorated sputum |
| Geo Location | USA:VA |
