Genome Meta Information: Corynebacterium mucifaciens ATCC 700355 (GCA_012396315.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_012396315.1 | ||
| HOMD Taxon-ID | HMT-0835 | ||
| Species Name (in use by HOMD) | Corynebacterium mucifaciens | ||
| Organism Name (as deposited) | HMT-835 Corynebacterium mucifaciens ATCC 700355 | ||
| Strain or Isolate | ATCC 700355 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium; s__Corynebacterium mucifaciens |
||
| Sequencing Technology | NovaSeq | ||
| Genome Coverage | 267.8 | ||
| Contigs |
|
||
| Total Sequence Length | 2,185,664 (bp) | ||
| GC Percentage | 65.47 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/012/396/315/GCA_012396315.1_ASM1239631v1 | ||
| CDS | 2085 | ||
| Genes | 2152 | ||
| mRNA | 2152 | ||
| misc RNA | 8 | ||
| rRNA | 5 | ||
| tRNA | 53 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.99 % | ||
| CheckM Completeness | 97.48 % | ||
| CheckM Contamination | 0.41 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM1239631v1 |
| GenBank Assembly Accession | GCA_012396315.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_012396315.1 [NCBI] |
| BioSample | SAMN14517857 [NCBI] |
| BioProject | PRJNA622446 [NCBI] |
| Submitter | Bacterial Special Pathogens Branch (CDC) |
| Submission Date | 2020-04-01T10:52:05.430 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | JAAXPF01 |
| NCBI TaxID | 57171 |
| Isolation Source | blood |
| Geo Location | Switzerland: Zurich |
