Genome Meta Information: Gemella sanguinis SS1508 (GCA_012396635.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_012396635.1 | ||
| HOMD Taxon-ID | HMT-0757 | ||
| Species Name (in use by HOMD) | Gemella sanguinis | ||
| Organism Name (as deposited) | HMT-757 Gemella sanguinis SS1508 | ||
| Strain or Isolate | SS1508 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Staphylococcales;f__Gemellaceae;g__Gemella; s__Gemella sanguinis |
||
| Sequencing Technology | NovaSeq | ||
| Genome Coverage | 125 | ||
| Contigs |
|
||
| Total Sequence Length | 1,795,201 (bp) | ||
| GC Percentage | 29.62 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/012/396/635/GCA_012396635.1_ASM1239663v1 | ||
| CDS | 1660 | ||
| Genes | 1731 | ||
| mRNA | 1731 | ||
| misc RNA | 24 | ||
| rRNA | 7 | ||
| tRNA | 39 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.99 % | ||
| CheckM Completeness | 99.19 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM1239663v1 |
| GenBank Assembly Accession | GCA_012396635.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_012396635.1 [NCBI] |
| BioSample | SAMN14517840 [NCBI] |
| BioProject | PRJNA622446 [NCBI] |
| Submitter | Bacterial Special Pathogens Branch (CDC) |
| Submission Date | 2020-04-01T10:52:05.108 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | JAAXPT01 |
| NCBI TaxID | 84135 |
| Isolation Source | blood |
| Geo Location | USA: Georgia |
