Genome Meta Information: Abiotrophia defectiva FDAARGOS_785 (GCA_013267415.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_013267415.1 | ||
| HOMD Taxon-ID | HMT-389 | ||
| Species Name (in use by HOMD) | Abiotrophia defectiva | ||
| Organism Name (as deposited) | HMT-389 Abiotrophia defectiva FDAARGOS_785 | ||
| Strain or Isolate | FDAARGOS_785 | ||
| GTDB (V) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Aerococcaceae;g__Abiotrophia; s__Abiotrophia defectiva |
||
| Sequencing Technology | Pacbio; Illumina | ||
| Genome Coverage | 1526.9x | ||
| Contigs |
|
||
| Total Sequence Length | 2,046,826 (bp) | ||
| GC Percentage | 47.0 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/013/267/415/GCA_013267415.1_ASM1326741v1 | ||
| CDS | 1838 | ||
| Genes | 1919 | ||
| mRNA | 1919 | ||
| misc RNA | 21 | ||
| rRNA | 12 | ||
| tRNA | 47 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.99 % | ||
| CheckM Completeness | 98.46 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 99.02 % | ||
| CheckM2 Contamination | 0.06 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM1326741v1 |
| GenBank Assembly Accession | GCA_013267415.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_013267415.1 [NCBI] |
| BioSample | SAMN11056500 [NCBI] |
| BioProject | PRJNA231221 [NCBI] |
| Submitter | US Food and Drug Administration |
| Submission Date | 2019-03-05T13:52:08.540 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 46125 |
| Isolation Source | missing |
| Geo Location | Germany: Braunschweig |
