Genome Meta Information: Streptococcus mitis S022-V3-A4 (GCA_013305725.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_013305725.1 | ||
| HOMD Taxon-ID | HMT-677 | ||
| Species Name (in use by HOMD) | Streptococcus mitis | ||
| Organism Name (as deposited) | HMT-677 Streptococcus mitis S022-V3-A4 | ||
| Strain or Isolate | S022-V3-A4 | ||
| GTDB (V) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus; s__Streptococcus mitis_BO |
||
| Sequencing Technology | Illumina; Oxford Nanopore | ||
| Genome Coverage | 400.0x | ||
| Contigs |
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| Total Sequence Length | 2,086,958 (bp) | ||
| GC Percentage | 39.75 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/013/305/725/GCA_013305725.1_ASM1330572v1 | ||
| CDS | 1928 | ||
| Genes | 2056 | ||
| mRNA | 2056 | ||
| misc RNA | 54 | ||
| rRNA | 12 | ||
| tRNA | 61 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 93.95 % | ||
| CheckM Completeness | 99.82 % | ||
| CheckM Contamination | 0.91 % | ||
| CheckM2 Completeness | 100 % | ||
| CheckM2 Contamination | 0.13 % | ||
| CRISPR-cas | 2 Contigs [View] [HOMD FTP Site] | ||
| Pangenomes (Beta) |
View in Anvi`o:
Streptococcus__mitis__HMT_677
(Interactive)
View SVG Image |
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| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM1330572v1 |
| GenBank Assembly Accession | GCA_013305725.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_013305725.1 [NCBI] |
| BioSample | SAMN11382546 [NCBI] |
| BioProject | PRJNA208927 [NCBI] |
| Submitter | Universita di Siena |
| Submission Date | 2019-04-10T05:42:04.708 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 28037 |
| Isolation Source | saliva |
| Geo Location | United Kingdom |
