Genome Meta Information: Enterococcus faecalis 111540027-2 (GCA_013344645.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_013344645.1 | ||
| HOMD Taxon-ID | HMT-0604 | ||
| Species Name (in use by HOMD) | Enterococcus faecalis | ||
| Organism Name (as deposited) | HMT-604 Enterococcus faecalis 111540027-2 | ||
| Strain or Isolate | 111540027-2 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Enterococcaceae;g__Enterococcus; s__Enterococcus faecalis |
||
| Sequencing Technology | Illumina HiSeq; Oxford Nanopore MiniION | ||
| Genome Coverage | |||
| Contigs |
|
||
| Total Sequence Length | 2,937,521 (bp) | ||
| GC Percentage | 37.53 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/013/344/645/GCA_013344645.1_ASM1334464v1 | ||
| CDS | 2795 | ||
| Genes | 2949 | ||
| mRNA | 2949 | ||
| misc RNA | 78 | ||
| rRNA | 12 | ||
| tRNA | 63 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.18 % | ||
| CheckM Completeness | 99.5 % | ||
| CheckM Contamination | 0.16 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM1334464v1 |
| GenBank Assembly Accession | GCA_013344645.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_013344645.1 [NCBI] |
| BioSample | SAMN13182396 [NCBI] |
| BioProject | PRJNA587161 [NCBI] |
| Submitter | Massachusetts Institute of Technology |
| Submission Date | 2019-11-01T17:52:04.286 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 1351 |
| Isolation Source | Surface |
| Geo Location | USA:International Space Statio |
