Genome Meta Information: Oribacterium sp. HMT-102 W9097 (GCA_013394775.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_013394775.1 | ||
| HOMD Taxon-ID | HMT-0102 | ||
| Species Name (in use by HOMD) | Oribacterium sp. HMT-102 | ||
| Organism Name (as deposited) | HMT-102 Oribacterium sp. HMT-102 W9097 | ||
| Strain or Isolate | W9097 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Oribacterium; s__Oribacterium sp013394775 |
||
| Sequencing Technology | PacBio Sequel | ||
| Genome Coverage | 164 | ||
| Contigs |
|
||
| Total Sequence Length | 2,527,423 (bp) | ||
| GC Percentage | 54.65 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/013/394/775/GCA_013394775.1_ASM1339477v1 | ||
| CDS | 2178 | ||
| Genes | 2289 | ||
| mRNA | 2289 | ||
| misc RNA | 51 | ||
| rRNA | 10 | ||
| tRNA | 49 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 94.22 % | ||
| CheckM Contamination | 2 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | No Pangenomes Available. | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM1339477v1 |
| GenBank Assembly Accession | GCA_013394775.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_013394775.1 [NCBI] |
| BioSample | SAMN15358533 [NCBI] |
| BioProject | PRJNA282954 [NCBI] |
| Submitter | The Forsyth Institute |
| Submission Date | 2020-06-24T14:59:07.386 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | JABXYT01 |
| NCBI TaxID | 671214 |
| Isolation Source | carious dentine oral cavity |
| Geo Location | United Kingdom: London |
