Genome Meta Information: Streptococcus salivarius DB-B5 (GCA_013822985.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_013822985.1 | ||
| HOMD Taxon-ID | HMT-0755 | ||
| Species Name (in use by HOMD) | Streptococcus salivarius | ||
| Organism Name (as deposited) | HMT-755 Streptococcus salivarius DB-B5 | ||
| Strain or Isolate | DB-B5 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus; s__Streptococcus salivarius |
||
| Sequencing Technology | Illumina MiSeq; PacBio Sequel | ||
| Genome Coverage | 1000 | ||
| Contigs |
|
||
| Total Sequence Length | 2,343,299 (bp) | ||
| GC Percentage | 39.9 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/013/822/985/GCA_013822985.1_ASM1382298v1 | ||
| CDS | 2100 | ||
| Genes | 2215 | ||
| mRNA | 2215 | ||
| misc RNA | 28 | ||
| rRNA | 18 | ||
| tRNA | 68 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 96.42 % | ||
| CheckM Completeness | 96.88 % | ||
| CheckM Contamination | 1.58 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM1382298v1 |
| GenBank Assembly Accession | GCA_013822985.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_013822985.1 [NCBI] |
| BioSample | SAMN15048692 [NCBI] |
| BioProject | PRJNA635659 [NCBI] |
| Submitter | Dose Biosystems |
| Submission Date | 2020-05-28T14:14:03.907 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 1304 |
| Isolation Source | oral |
| Geo Location | Canada |
