Genome Meta Information: Klebsiella aerogenes WP5-W18-CRE-01 (GCA_014169215.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_014169215.1 | ||
| HOMD Taxon-ID | HMT-0153 | ||
| Species Name (in use by HOMD) | Klebsiella aerogenes | ||
| Organism Name (as deposited) | HMT-153 Klebsiella aerogenes WP5-W18-CRE-01 | ||
| Strain or Isolate | WP5-W18-CRE-01 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Klebsiella; s__Klebsiella aerogenes |
||
| Sequencing Technology | Sequel; NextSeq 500 | ||
| Genome Coverage | 284 | ||
| Contigs |
|
||
| Total Sequence Length | 5,462,605 (bp) | ||
| GC Percentage | 54.81 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/014/169/215/GCA_014169215.1_ASM1416921v1 | ||
| CDS | 5057 | ||
| Genes | 5169 | ||
| mRNA | 0 | ||
| misc RNA | 0 | ||
| rRNA | 25 | ||
| tRNA | 86 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 98.78 % | ||
| CheckM Completeness | 96.62 % | ||
| CheckM Contamination | 4.47 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM1416921v1 |
| GenBank Assembly Accession | GCA_014169215.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_014169215.1 [NCBI] |
| BioSample | SAMD00194509 [NCBI] |
| BioProject | PRJDB6962 [NCBI] |
| Submitter | Laboratory of Bacterial Genomics, Pathogen Genomics Center, National Institute of Infectious Diseases |
| Submission Date | 2020-07-21T15:07:53.820 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 548 |
| Isolation Source | |
| Geo Location | Japan:Tokyo |
