Genome Meta Information: Janibacter indicus YB324 (GCA_014217915.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_014217915.1 | ||
| HOMD Taxon-ID | HMT-0339 | ||
| Species Name (in use by HOMD) | Janibacter indicus | ||
| Organism Name (as deposited) | HMT-339 Janibacter indicus YB324 | ||
| Strain or Isolate | YB324 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Dermatophilaceae;g__Janibacter; s__Janibacter indicus |
||
| Sequencing Technology | PacBio Sequel | ||
| Genome Coverage | 176 | ||
| Contigs |
|
||
| Total Sequence Length | 3,369,845 (bp) | ||
| GC Percentage | 71.4 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/014/217/915/GCA_014217915.1_ASM1421791v1 | ||
| CDS | 3274 | ||
| Genes | 3355 | ||
| mRNA | 3355 | ||
| misc RNA | 24 | ||
| rRNA | 6 | ||
| tRNA | 50 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 93.23 % | ||
| CheckM Contamination | 6.36 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM1421791v1 |
| GenBank Assembly Accession | GCA_014217915.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_014217915.1 [NCBI] |
| BioSample | SAMN15719906 [NCBI] |
| BioProject | PRJNA655087 [NCBI] |
| Submitter | Third Institute Of Oceanography,MNR |
| Submission Date | 2020-08-04T05:35:03.940 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 2761047 |
| Isolation Source | marine sediment |
| Geo Location | Atlantic Ocean: South Atlantic |
