Genome Meta Information: Veillonella parvula NSJ-78 (GCA_014306175.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_014306175.1 | ||
| HOMD Taxon-ID | HMT-0161 | ||
| Species Name (in use by HOMD) | Veillonella parvula | ||
| Organism Name (as deposited) | HMT-161 Veillonella parvula NSJ-78 | ||
| Strain or Isolate | NSJ-78 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Negativicutes;o__Veillonellales;f__Veillonellaceae;g__Veillonella; s__Veillonella hominis |
||
| Sequencing Technology | BGISEQ | ||
| Genome Coverage | 62 | ||
| Contigs |
|
||
| Total Sequence Length | 2,041,457 (bp) | ||
| GC Percentage | 38.62 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/014/306/175/GCA_014306175.1_ASM1430617v1 | ||
| CDS | 1849 | ||
| Genes | 1926 | ||
| mRNA | 1926 | ||
| misc RNA | 22 | ||
| rRNA | 6 | ||
| tRNA | 48 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 99.77 % | ||
| CheckM Contamination | 0.05 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 2 Contigs [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM1430617v1 |
| GenBank Assembly Accession | GCA_014306175.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_014306175.1 [NCBI] |
| BioSample | SAMN15815150 [NCBI] |
| BioProject | PRJNA656402 [NCBI] |
| Submitter | WFCC-MRCEN World Data Centre for Microoganisms(WDCM) |
| Submission Date | 2020-08-13T21:24:05.363 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | JACRWI01 |
| NCBI TaxID | 2764330 |
| Isolation Source | feces |
| Geo Location | China:Beijing |
