Genome Meta Information: Alkalihalobacillus clausii 088AE (GCA_014338545.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_014338545.1 | ||
| HOMD Taxon-ID | HMT-045 | ||
| Species Name (in use by HOMD) | Alkalihalobacillus clausii | ||
| Organism Name (as deposited) | HMT-045 Alkalihalobacillus clausii 088AE | ||
| Strain or Isolate | 088AE | ||
| GTDB (V) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Bacillales_H;f__Bacillaceae_D;g__Shouchella; s__Shouchella clausii |
||
| Sequencing Technology | Illumina MiSeq; Oxford Nanopore | ||
| Genome Coverage | 400.0x | ||
| Contigs |
|
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| Total Sequence Length | 4,598,557 (bp) | ||
| GC Percentage | 44.74 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/014/338/545/GCA_014338545.1_ASM1433854v1 | ||
| CDS | 4550 | ||
| Genes | 4723 | ||
| mRNA | 4723 | ||
| misc RNA | 75 | ||
| rRNA | 22 | ||
| tRNA | 75 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.99 % | ||
| CheckM Completeness | 98.67 % | ||
| CheckM Contamination | 1 % | ||
| CheckM2 Completeness | 100 % | ||
| CheckM2 Contamination | 1.4 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM1433854v1 |
| GenBank Assembly Accession | GCA_014338545.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_014338545.1 [NCBI] |
| BioSample | SAMN09662694 [NCBI] |
| BioProject | PRJNA481187 [NCBI] |
| Submitter | Advanced Enzyme Technologies Limited |
| Submission Date | 2018-07-16T01:31:03.033 |
| Assembly Method | |
| Assembly Level | Chromosome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 79880 |
| Isolation Source | soil |
| Geo Location | India: Maharashtra |
