Genome Meta Information: Haemophilus influenzae TAMBA230 (GCA_014701215.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_014701215.1 | ||
| HOMD Taxon-ID | HMT-0641 | ||
| Species Name (in use by HOMD) | Haemophilus influenzae | ||
| Organism Name (as deposited) | HMT-641 Haemophilus influenzae TAMBA230 | ||
| Strain or Isolate | TAMBA230 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Pasteurellaceae;g__Haemophilus; s__Haemophilus influenzae |
||
| Sequencing Technology | illumina MiSeq; Nanopore GridION | ||
| Genome Coverage | 951 | ||
| Contigs |
|
||
| Total Sequence Length | 1,809,645 (bp) | ||
| GC Percentage | 38.03 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/014/701/215/GCA_014701215.1_ASM1470121v1 | ||
| CDS | 1688 | ||
| Genes | 1798 | ||
| mRNA | 1798 | ||
| misc RNA | 31 | ||
| rRNA | 19 | ||
| tRNA | 59 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 97.38 % | ||
| CheckM Completeness | 99.02 % | ||
| CheckM Contamination | 0.02 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM1470121v1 |
| GenBank Assembly Accession | GCA_014701215.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_014701215.1 [NCBI] |
| BioSample | SAMD00204789 [NCBI] |
| BioProject | PRJDB9304 [NCBI] |
| Submitter | Department of Bacteriology II, National Institute of Infectious Diseases |
| Submission Date | 2020-09-16T15:06:22.817 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 727 |
| Isolation Source | |
| Geo Location | Japan:Hyogo, Tamba, Hikami |
