Genome Meta Information: Streptococcus mutans 27-3 (GCA_014842815.3)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_014842815.3 | ||
| HOMD Taxon-ID | HMT-0686 | ||
| Species Name (in use by HOMD) | Streptococcus mutans | ||
| Organism Name (as deposited) | HMT-686 Streptococcus mutans 27-3 | ||
| Strain or Isolate | 27-3 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus; s__Streptococcus mutans |
||
| Sequencing Technology | PacBio; Illumina HiSeq | ||
| Genome Coverage | 824 | ||
| Contigs |
|
||
| Total Sequence Length | 1,978,522 (bp) | ||
| GC Percentage | 37.03 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/014/842/815/GCA_014842815.3_ASM1484281v3 | ||
| CDS | 1825 | ||
| Genes | 1934 | ||
| mRNA | 1934 | ||
| misc RNA | 28 | ||
| rRNA | 15 | ||
| tRNA | 65 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.04 % | ||
| CheckM Completeness | 96.1 % | ||
| CheckM Contamination | 0.44 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM1484281v3 |
| GenBank Assembly Accession | GCA_014842815.3 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_014842815.3 [NCBI] |
| BioSample | SAMN16268312 [NCBI] |
| BioProject | PRJNA665774 [NCBI] |
| Submitter | LSU health Sciences Center |
| Submission Date | 2020-09-25T23:29:04.750 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 1309 |
| Isolation Source | oral cavity |
| Geo Location | USA: Oklahoma City, OK |
